Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934768.1_cds_XP_016480781.1_72185
CDS Infomation

[gene=LOC107801889] [db_xref=GeneID:107801889] [protein=protein ESKIMO 1-like] [protein_id=XP_016480781.1] [location=complement(join(49196..49544,49626..49784,49884..50083,50559..50730,50809..51398))] [gbkey=CDS]
Sequence

ATGCATTCACTCCGCGGCCGGAAAACGCCACTCATTTCCTCTGAATTATTCAACATGAAG
CACCATAGTGGCCGTAAGAATAATAACCTCTCTATATTCGTAGTCGTTTTCTCCATATTC
CTCTTTGGTTGTTTCATGTACAATGAAGACGTAAAGTCTATTGCAGAATTTCCATTTTCT
ACACCCAAAGCTCAAGAAATCATTGAACAAGAAAACGGTATTCAAGAAAGCAGTGTTTCA
ACTGTGGTTATGAATTCAAGAACTGTAGTTGAAACGGAAACAGAGGCCGTTAGTACTGAA
CGGGAGGTGGTGAATTTGAAGTCTAGTGATGAAGAGGAAACGGAAACAGAGCAAGAGGAG
CAGAAAATTGAAATGCCAGCTGAAGAAGAAGAAGAAGAGAACATTGAATTGCCACCTGAA
GATTGTGATCTTTTTGTAGGGAATTGGGTTTATGATAATGTAACACACCCAATTTACAAA
GAACATGAATGTGAATTCCTCACTGCTCAAGTTACTTGCTTGAGAAATGGAAGACAAGAT
TCTATGTATCAGAATTGGAGGTGGCAACCCAGAGACTGTTCTTTACCCAAGTTTAAACCA
AGATTGCTGCTTGAGAAGCTAAGGAATAAGAGACTCATGTTTGTGGGAGACTCTTTGAAT
AGAAATCAATGGGAATCTATGGTTTGTTTGGTTCAATCCGTTGTTCCTTCTGGCCGAAAA
AGCTTAAACAAGACTGGCTCTTTATCTGTTTTCAGAATTGAGGATTATAATGCCACGGTG
GAGTTTTACTGGGCTCCATTTCTGGTGGAGTCAAACTCAGATGATCCAAATATGCATAGC
ATCTTGAACAGAATTATCATGCCAGAATCTATTGAGAAGCATGGCAACAACTGGAAGAAT
GTGGATTATCTCATCTTCAACACATACATTTGGTGGATGAACACTTTTACTATGAAAATC
TTGCGAGGTTCATTCGACGAAGGGGCGACGGAATACTACGAGATAGATAGACCAATAGCT
TATAGGAGAGTTTTGACAACATGGTCCCAATGGGTCGATAACAATATAAATCCAAATCGC
ACCCAAGTTTTCTTCATGAGCATGTCTCCACTTCATATAAAGAGTTTAGATTGGGAAAAT
CCAGATGGAATAAAATGTGCTAAAGAGACAACACCAATATTGAACACATCAATGCCACTA
GATGTTGGAACAGATAAGAGGCTGTTTGTGATAGCAGCAAATGTGACTGAATCAATGAAA
GTCCTAGTTTATTTTCAAAACATTACAGCATTGTCAGAGCACAGAAAAGATGGGCACACA
TCAGTCTACACAATTCGTCAAGGCAAAATGCTAACACCTGAGCAACAAGCTGATCCTGCG
ACCTATGCTGATTGTATCCATTGGTGCCTCCCTGGATTGCCTGACACTTGGAATGAATTC
CTCTATTCGCGTATCATTTCGCGTTCTTGA

Peptide Sequence

PEP ID

XP_016480781.1
PEP Infomation

PREDICTED: protein ESKIMO 1-like [Nicotiana tabacum]
Sequence

MHSLRGRKTPLISSELFNMKHHSGRKNNNLSIFVVVFSIFLFGCFMYNEDVKSIAEFPFS
TPKAQEIIEQENGIQESSVSTVVMNSRTVVETETEAVSTEREVVNLKSSDEEETETEQEE
QKIEMPAEEEEEENIELPPEDCDLFVGNWVYDNVTHPIYKEHECEFLTAQVTCLRNGRQD
SMYQNWRWQPRDCSLPKFKPRLLLEKLRNKRLMFVGDSLNRNQWESMVCLVQSVVPSGRK
SLNKTGSLSVFRIEDYNATVEFYWAPFLVESNSDDPNMHSILNRIIMPESIEKHGNNWKN
VDYLIFNTYIWWMNTFTMKILRGSFDEGATEYYEIDRPIAYRRVLTTWSQWVDNNINPNR
TQVFFMSMSPLHIKSLDWENPDGIKCAKETTPILNTSMPLDVGTDKRLFVIAANVTESMK
VLVYFQNITALSEHRKDGHTSVYTIRQGKMLTPEQQADPATYADCIHWCLPGLPDTWNEF
LYSRIISRS

Transcript Sequence

Gene sequence data has not been registered.